View source for Nearest Neighbor Distances Calculation with ImageJ

===Introduction===

This is a imageJ plugin for calculating the nearest neighbor distances of the particles.

===Author===
[mailto:maxm@predictivedesigntech.com Yuxiong Mao]

===Installation===

Download the plugin file from [https://icme.hpc.msstate.edu/mediawiki/images/9/9a/Nnd_.class here].

Copy the Nnd_.class file to the ImageJ/Plugins/Analyze folder and restart the ImageJ.  

Then, you can call the plugin at  Plugins -> Analyze -> Nnd.

===Usage===
Follow the last step (step 8) of [[Particle_Characterization_with_ImageJ | ImageJ Beginner Tutorial 1]].

Click Analyze -> Set Measurements, Make sure "Centroid" is checked.

Click Analyze -> Analyze Particles.. and then ok.

The results window will display the X and Y coordinates of the particle's centroid.

Click Plugins -> Analyze -> Nnd to get the nearest neighbor distances.

== Problems ==

If you encounter any problem using this plugin, please send an email to [mailto:maxm@predictivedesigntech.com Yuxiong Mao]