MicroMegas PBS scripts:mmp.pbs.talon

mmp.pbs.talon

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#!/bin/bash
#PBS -N mmp
#PBS -q special@talon
#PBS -l nodes=4:ppn=12
#PBS -l walltime=700:00:00
#PBS -m abe
#PBS -j oe
#PBS -r n
#PBS -V
# Set the stack size to unlimited

ulimit -s unlimited
# Set the core size to zero

ulimit -c 0
# List all resource limits

ulimit -a
echo "I ran on:"
# Print the nodes on which the project will run

cat $PBS_NODEFILE
# Change your execution directory to /data/lustre/<your_username> for fast
# I/O
cd /data/lustre/<your_username>

# Copy all necessary files from your project directory 
# (/cavs/cmd/data1/users/<your_username>/<your_project_directory>) to the 
# execution directory (/data/lustre/<your_username>)
cp -fr /cavs/cmd/data1/users/<your_username>/<your_project_directory>/mmp .

# Go to the directory with the ‘mmp’ executable
cd /data/lustre/<your_username>/mmp/bin

# Run the parallel ‘mmp’ code on 4x12=48 parallel processes with/without 
# cross-slip activated (set GLDEV to be T or F in 
# /data/lustre/<your_username>/mmp/in/ContCu)

/usr/bin/time -p -o ../mmp_tests/[no-]cross-slip/mmp.time ./mmp | tee ../mmp_tests/[no-]cross-slip/mmp.log

# Move all files from the execution directory (/data/lustre/<your_username>) 
# back to your project directory 
# (/cavs/cmd/data1/users/<your_username>/<your_project_directory>)

cd /data/lustre/<your_username>/
cp -fr mmp/ /cavs/cmd/data1/users/<your_username>/<your_project_directory>/mmp_test/1
#

echo "All Done!"